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  5. Sobic.002G306000.2

Sobic.002G306000.2


Description : calmodulin binding;transcription regulators


Gene families : OG_01_0002584 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002584_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G306000.2
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G306000.2
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_17
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_83


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR014756 Ig_E-set SUPERFAMILY 379 465
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 567 672
IPR000048 IQ_motif_EF-hand-BS ProSiteProfiles 773 802
IPR005559 CG-1_dom SMART 30 148
IPR036770 Ankyrin_rpt-contain_sf Gene3D 541 745
IPR005559 CG-1_dom Pfam 34 146
IPR002110 Ankyrin_rpt ProSiteProfiles 607 639
IPR013783 Ig-like_fold Gene3D 372 471
IPR005559 CG-1_dom ProSiteProfiles 27 153
IPR000048 IQ_motif_EF-hand-BS ProSiteProfiles 878 906
IPR027417 P-loop_NTPase SUPERFAMILY 722 823
IPR000048 IQ_motif_EF-hand-BS Pfam 798 817
IPR000048 IQ_motif_EF-hand-BS Pfam 775 793
IPR000048 IQ_motif_EF-hand-BS Pfam 879 898
IPR002110 Ankyrin_rpt Pfam 580 670
IPR000048 IQ_motif_EF-hand-BS SMART 876 898
IPR000048 IQ_motif_EF-hand-BS SMART 795 817
IPR000048 IQ_motif_EF-hand-BS SMART 772 794
IPR002110 Ankyrin_rpt SMART 607 636
IPR002110 Ankyrin_rpt SMART 646 675
IPR000048 IQ_motif_EF-hand-BS ProSiteProfiles 796 820

No CAZYmes available for this sequence

No external refs found!