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  5. Sobic.002G310400.1

Sobic.002G310400.1


Description : Chalcone and stilbene synthase family protein


Gene families : OG_01_0000081 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000081_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G310400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G310400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_285
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_56


Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process ISM GOs from InterProScan
MF GO:0016746 acyltransferase activity ISM GOs from InterProScan
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001099 Chalcone/stilbene_synt_N Pfam 10 232
IPR012328 Chalcone/stilbene_synt_C Pfam 242 389
IPR011141 Polyketide_synthase_type-III PIRSF 6 392
IPR016039 Thiolase-like Gene3D 240 391
IPR016039 Thiolase-like SUPERFAMILY 11 234
IPR011141 Polyketide_synthase_type-III PANTHER 8 390
IPR016039 Thiolase-like SUPERFAMILY 219 389
IPR016039 Thiolase-like Gene3D 2 239

No CAZYmes available for this sequence

No external refs found!