Sobic.002G315800.3

Description : Cysteine proteinases superfamily protein

Gene families : OG_01_0002542 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002542_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G315800.3
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G315800.3
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_220
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_231

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004197	cysteine-type endopeptidase activity	ISM	GOs from InterProScan
BP	GO:0006508	proteolysis	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	ISM	GOs from InterProScan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050790	regulation of catalytic activity	ISM	GOs from InterProScan
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR012599	Propeptide_C1A	Pfam	42	81
IPR000668	Peptidase_C1A_C	PRINTS	284	294
IPR000668	Peptidase_C1A_C	PRINTS	300	306
IPR000668	Peptidase_C1A_C	PRINTS	123	138
IPR000668	Peptidase_C1A_C	SMART	101	336
IPR025660	Pept_his_AS	ProSitePatterns	282	292
IPR038765	Papain-like_cys_pep_sf	SUPERFAMILY	44	337
IPR000169	Pept_cys_AS	ProSitePatterns	123	134
IPR000668	Peptidase_C1A_C	Pfam	101	335

No CAZYmes available for this sequence

External Links

No external refs found!