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Description : villin 4
Gene families : OG_01_0000277 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000277_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G327000.2 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G327000.2 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_329 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_69 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003779 | actin binding | ISM | GOs from InterProScan |
| BP | GO:0007010 | cytoskeleton organization | ISM | GOs from InterProScan |
| MF | GO:0051015 | actin filament binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR036180 | Gelsolin-like_dom_sf | SUPERFAMILY | 249 | 430 |
| IPR007122 | Villin/Gelsolin | PRINTS | 439 | 457 |
| IPR007122 | Villin/Gelsolin | PRINTS | 595 | 614 |
| IPR007122 | Villin/Gelsolin | PRINTS | 414 | 430 |
| IPR007122 | Villin/Gelsolin | PRINTS | 535 | 555 |
| IPR007122 | Villin/Gelsolin | PRINTS | 325 | 346 |
| IPR007122 | Villin/Gelsolin | PRINTS | 647 | 669 |
| IPR007122 | Villin/Gelsolin | PRINTS | 472 | 492 |
| IPR036886 | Villin_headpiece_dom_sf | SUPERFAMILY | 884 | 958 |
| IPR007122 | Villin/Gelsolin | PANTHER | 1 | 958 |
| IPR036886 | Villin_headpiece_dom_sf | Gene3D | 896 | 958 |
| IPR029006 | ADF-H/Gelsolin-like_dom_sf | Gene3D | 616 | 738 |
| IPR029006 | ADF-H/Gelsolin-like_dom_sf | Gene3D | 133 | 248 |
| IPR029006 | ADF-H/Gelsolin-like_dom_sf | Gene3D | 521 | 615 |
| IPR007122 | Villin/Gelsolin | SMART | 254 | 346 |
| IPR007122 | Villin/Gelsolin | SMART | 626 | 722 |
| IPR007122 | Villin/Gelsolin | SMART | 520 | 609 |
| IPR007122 | Villin/Gelsolin | SMART | 141 | 236 |
| IPR007122 | Villin/Gelsolin | SMART | 19 | 117 |
| IPR007122 | Villin/Gelsolin | SMART | 395 | 492 |
| IPR003128 | Villin_headpiece | Pfam | 923 | 958 |
| IPR029006 | ADF-H/Gelsolin-like_dom_sf | Gene3D | 249 | 357 |
| IPR003128 | Villin_headpiece | SMART | 923 | 958 |
| IPR029006 | ADF-H/Gelsolin-like_dom_sf | Gene3D | 7 | 132 |
| IPR003128 | Villin_headpiece | ProSiteProfiles | 893 | 958 |
| IPR007123 | Gelsolin-like_dom | Pfam | 272 | 339 |
| IPR007123 | Gelsolin-like_dom | Pfam | 28 | 111 |
| IPR007123 | Gelsolin-like_dom | Pfam | 644 | 715 |
| IPR007123 | Gelsolin-like_dom | Pfam | 152 | 218 |
| IPR029006 | ADF-H/Gelsolin-like_dom_sf | Gene3D | 384 | 519 |
No CAZYmes available for this sequence
| No external refs found! |