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  5. Sobic.002G330500.1

Sobic.002G330500.1


Description : isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2


Gene families : OG_01_0002039 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002039_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G330500.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G330500.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_147
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_227


Type GO Term Name Evidence Source
MF GO:0004452 isopentenyl-diphosphate delta-isomerase activity ISM GOs from InterProScan
BP GO:0008299 isoprenoid biosynthetic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011876 IsopentenylPP_isomerase_typ1 PIRSF 3 231
IPR011876 IsopentenylPP_isomerase_typ1 TIGRFAM 24 206
IPR000086 NUDIX_hydrolase_dom ProSiteProfiles 53 205
IPR011876 IsopentenylPP_isomerase_typ1 CDD 21 208
IPR015797 NUDIX_hydrolase-like_dom_sf SUPERFAMILY 23 218
IPR000086 NUDIX_hydrolase_dom Pfam 54 193

No CAZYmes available for this sequence

No external refs found!