Sobic.002G339800.2

Description : HSI2-like 1

Gene families : OG_01_0002290 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002290_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G339800.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G339800.2
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_216
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_104

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011124	Znf_CW	ProSiteProfiles	724	774
IPR011124	Znf_CW	Pfam	729	772
IPR015300	DNA-bd_pseudobarrel_sf	Gene3D	447	574
IPR003340	B3_DNA-bd	ProSiteProfiles	469	570
IPR015300	DNA-bd_pseudobarrel_sf	SUPERFAMILY	466	569
IPR003340	B3_DNA-bd	CDD	467	568
IPR003340	B3_DNA-bd	SMART	469	569
IPR003340	B3_DNA-bd	Pfam	469	568

No CAZYmes available for this sequence

External Links

No external refs found!