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  5. Sobic.002G352200.1

Sobic.002G352200.1


Description : Succinyl-CoA ligase, alpha subunit


Gene families : OG_01_0015162 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015162_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G352200.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G352200.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_246
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_171


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR005811 SUCC_ACL_C Pfam 233 354
IPR016102 Succinyl-CoA_synth-like Gene3D 203 377
IPR016102 Succinyl-CoA_synth-like SUPERFAMILY 205 373
IPR033847 Citrt_syn/SCS-alpha_CS ProSitePatterns 234 263
IPR005810 CoA_lig_alpha Hamap 82 371
IPR017440 Cit_synth/succinyl-CoA_lig_AS ProSitePatterns 319 332
IPR005810 CoA_lig_alpha TIGRFAM 85 370
IPR003781 CoA-bd Pfam 87 180
IPR003781 CoA-bd SMART 85 181
IPR036291 NAD(P)-bd_dom_sf SUPERFAMILY 83 204

No CAZYmes available for this sequence

No external refs found!