Sobic.002G353500.1

Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein

Gene families : OG_01_0014129 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014129_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G353500.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G353500.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_106
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_95

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	None	Extended
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008094	ATP-dependent activity, acting on DNA	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031011	Ino80 complex	ISM	GOs from InterProScan
CC	GO:0031248	protein acetyltransferase complex	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0035267	NuA4 histone acetyltransferase complex	ISM	GOs from InterProScan
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043189	H4/H2A histone acetyltransferase complex	None	Extended
CC	GO:0070603	SWI/SNF superfamily-type complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0097255	R2TP complex	ISM	GOs from InterProScan
CC	GO:0097346	INO80-type complex	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
CC	GO:1902493	acetyltransferase complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1902562	H4 histone acetyltransferase complex	None	Extended
CC	GO:1904949	ATPase complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003593	AAA+_ATPase	SMART	66	392
IPR027238	RuvB-like	PANTHER	1	467
IPR041048	RuvB-like_C	Pfam	381	446
IPR027417	P-loop_NTPase	SUPERFAMILY	41	444
IPR010339	TIP49_P-loop	Pfam	18	376
IPR027417	P-loop_NTPase	Gene3D	14	370
IPR042487	RuvBL1/2_DNA/RNA_bd_dom	Gene3D	123	259

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.002G353500.1

Expression Profile

Co-expression Networks

Functional Annotation