1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.002G364900.1

Sobic.002G364900.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0005047 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005047_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G364900.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G364900.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_248
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_134


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR044605 At1g26460-like PANTHER 11 616
IPR002885 Pentatricopeptide_rpt TIGRFAM 496 529
IPR002885 Pentatricopeptide_rpt TIGRFAM 532 564
IPR002885 Pentatricopeptide_rpt Pfam 493 539
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 494 528
IPR011990 TPR-like_helical_dom_sf Gene3D 108 312
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 183 217
IPR011990 TPR-like_helical_dom_sf Gene3D 360 607
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 529 563

No CAZYmes available for this sequence

No external refs found!