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  5. Sobic.002G385700.2

Sobic.002G385700.2


Description : malate dehydrogenase


Gene families : OG_01_0011051 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011051_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G385700.2
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G385700.2
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_36
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_3


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
BP GO:0006099 tricarboxylic acid cycle ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor ISM GOs from InterProScan
MF GO:0030060 L-malate dehydrogenase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036291 NAD(P)-bd_dom_sf SUPERFAMILY 68 210
IPR022383 Lactate/malate_DH_C Pfam 212 377
IPR001236 Lactate/malate_DH_N Pfam 68 210
IPR015955 Lactate_DH/Glyco_Ohase_4_C SUPERFAMILY 211 379
IPR015955 Lactate_DH/Glyco_Ohase_4_C Gene3D 212 384
IPR010097 Malate_DH_type1 TIGRFAM 68 380
IPR010097 Malate_DH_type1 CDD 67 379

No CAZYmes available for this sequence

No external refs found!