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  5. Sobic.002G386400.1

Sobic.002G386400.1


Description : chloroplast RNA-binding protein 29


Gene families : OG_01_0006373 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006373_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G386400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G386400.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_68


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000504 RRM_dom Pfam 80 150
IPR000504 RRM_dom Pfam 186 256
IPR000504 RRM_dom ProSiteProfiles 184 262
IPR035979 RBD_domain_sf SUPERFAMILY 182 267
IPR035979 RBD_domain_sf SUPERFAMILY 75 181
IPR000504 RRM_dom SMART 185 258
IPR000504 RRM_dom SMART 79 152
IPR000504 RRM_dom ProSiteProfiles 78 156
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 181 268
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 53 180

No CAZYmes available for this sequence

No external refs found!