1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.002G401500.1

Sobic.002G401500.1


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0004032 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004032_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G401500.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G401500.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_252
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_69


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt Pfam 256 294
IPR001680 WD40_rpt ProSiteProfiles 261 303
IPR024298 ACE1_Sec16_Sec31 Pfam 557 751
IPR040251 SEC31-like PANTHER 2 920
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 1 339
IPR001680 WD40_rpt ProSiteProfiles 120 156
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 15 338
IPR001680 WD40_rpt SMART 297 337
IPR001680 WD40_rpt SMART 162 203
IPR001680 WD40_rpt SMART 254 294
IPR001680 WD40_rpt SMART 206 250
IPR001680 WD40_rpt SMART 54 101
IPR001680 WD40_rpt SMART 113 153
IPR040251 SEC31-like PANTHER 932 1126
IPR001680 WD40_rpt ProSiteProfiles 177 212

No CAZYmes available for this sequence

No external refs found!