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  5. Sobic.002G406400.1

Sobic.002G406400.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0012661 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012661_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G406400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G406400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_68
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_158


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt Pfam 298 323
IPR011990 TPR-like_helical_dom_sf Gene3D 257 405
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 256 290
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 186 220
IPR011990 TPR-like_helical_dom_sf Gene3D 98 255
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 291 325
IPR033443 PPR_long Pfam 164 276
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 221 255
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 151 185
IPR002885 Pentatricopeptide_rpt TIGRFAM 155 186
IPR002885 Pentatricopeptide_rpt TIGRFAM 224 251
IPR002885 Pentatricopeptide_rpt TIGRFAM 295 325
IPR002885 Pentatricopeptide_rpt TIGRFAM 189 221

No CAZYmes available for this sequence

No external refs found!