Sobic.002G407800.3

Description : isopentenyltransferase 9

Gene families : OG_01_0007767 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007767_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G407800.3
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G407800.3	No neighbors in network
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_48

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR018022	IPT	Hamap	58	384
IPR027417	P-loop_NTPase	SUPERFAMILY	58	177
IPR018022	IPT	TIGRFAM	58	378
IPR027417	P-loop_NTPase	Gene3D	56	422
IPR027417	P-loop_NTPase	SUPERFAMILY	57	386
IPR039657	Dimethylallyltransferase	PANTHER	43	443

No CAZYmes available for this sequence

External Links

No external refs found!