Sobic.002G426400.1

Description : lon protease 1

Gene families : OG_01_0001121 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001121_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G426400.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G426400.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_106
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_202

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004176	ATP-dependent peptidase activity	ISM	GOs from InterProScan
MF	GO:0004252	serine-type endopeptidase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006508	proteolysis	ISM	GOs from InterProScan
BP	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0030163	protein catabolic process	ISM	GOs from InterProScan
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003111	Lon_prtase_N	Pfam	105	312
IPR027417	P-loop_NTPase	SUPERFAMILY	425	676
IPR020568	Ribosomal_Su5_D2-typ_SF	SUPERFAMILY	794	974
IPR008268	Peptidase_S16_AS	ProSitePatterns	878	886
IPR014721	Ribsml_uS5_D2-typ_fold_subgr	Gene3D	785	981
IPR008269	Lon_proteolytic	Pfam	769	973
IPR003593	AAA+_ATPase	SMART	461	606
IPR003959	ATPase_AAA_core	Pfam	465	602
IPR027417	P-loop_NTPase	Gene3D	426	604
IPR015947	PUA-like_sf	SUPERFAMILY	106	311
IPR027065	Lon_Prtase	PANTHER	3	742
IPR027065	Lon_Prtase	PANTHER	747	981
IPR027503	Lonm_euk	Hamap	2	977
IPR008269	Lon_proteolytic	ProSiteProfiles	791	975
IPR003111	Lon_prtase_N	SMART	102	312
IPR003111	Lon_prtase_N	ProSiteProfiles	103	312
IPR004815	Lon_bac/euk-typ	TIGRFAM	105	973

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.002G426400.1

Expression Profile

Co-expression Networks

Functional Annotation