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  5. Sobic.002G426900.1

Sobic.002G426900.1


Description : Heat shock protein DnaJ with tetratricopeptide repeat


Gene families : OG_01_0013437 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013437_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G426900.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G426900.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_10
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_113


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001623 DnaJ_domain SMART 404 476
IPR001623 DnaJ_domain ProSiteProfiles 405 476
IPR001623 DnaJ_domain CDD 405 445
IPR019734 TPR_repeat SMART 289 322
IPR036869 J_dom_sf SUPERFAMILY 403 439
IPR011990 TPR-like_helical_dom_sf Gene3D 211 361
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 253 348

No CAZYmes available for this sequence

No external refs found!