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  5. Sobic.002G429000.2

Sobic.002G429000.2


Description : Thiamine pyrophosphate dependent pyruvate decarboxylase family protein


Gene families : OG_01_0000639 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000639_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G429000.2
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G429000.2
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_21
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_131


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0016831 carboxy-lyase activity ISM GOs from InterProScan
MF GO:0030976 thiamine pyrophosphate binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR029061 THDP-binding SUPERFAMILY 357 525
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom Pfam 43 98
IPR029035 DHS-like_NAD/FAD-binding_dom SUPERFAMILY 200 335
IPR012110 PDC/IPDC-like PIRSF 99 242
IPR012110 PDC/IPDC-like PIRSF 38 98
IPR012110 PDC/IPDC-like PIRSF 475 524
IPR012110 PDC/IPDC-like PIRSF 239 482
IPR012110 PDC/IPDC-like PANTHER 476 529
IPR012110 PDC/IPDC-like PANTHER 1 98
IPR012110 PDC/IPDC-like PANTHER 99 476
IPR011766 TPP_enzyme_TPP-bd Pfam 403 466
IPR029061 THDP-binding SUPERFAMILY 43 169

No CAZYmes available for this sequence

No external refs found!