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  5. Sobic.003G004300.1

Sobic.003G004300.1


Description : RNA-binding KH domain-containing protein


Gene families : OG_01_0001561 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001561_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G004300.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G004300.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_137
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_74


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR004087 KH_dom SMART 471 546
IPR004087 KH_dom SMART 242 316
IPR004087 KH_dom SMART 386 459
IPR004087 KH_dom SMART 43 113
IPR004087 KH_dom SMART 640 710
IPR036612 KH_dom_type_1_sf Gene3D 473 548
IPR036612 KH_dom_type_1_sf Gene3D 46 106
IPR004088 KH_dom_type_1 Pfam 246 312
IPR004088 KH_dom_type_1 Pfam 390 441
IPR004088 KH_dom_type_1 Pfam 643 706
IPR004088 KH_dom_type_1 Pfam 48 100
IPR004088 KH_dom_type_1 Pfam 475 542
IPR036612 KH_dom_type_1_sf SUPERFAMILY 239 317
IPR036612 KH_dom_type_1_sf Gene3D 386 461
IPR036612 KH_dom_type_1_sf Gene3D 637 713
IPR036612 KH_dom_type_1_sf SUPERFAMILY 387 460
IPR036612 KH_dom_type_1_sf SUPERFAMILY 467 548
IPR036612 KH_dom_type_1_sf SUPERFAMILY 638 709
IPR036612 KH_dom_type_1_sf SUPERFAMILY 41 98

No CAZYmes available for this sequence

No external refs found!