Sobic.003G007300.3

Description : Predicted eukaryotic LigT

Gene families : OG_01_0001354 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001354_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G007300.3
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G007300.3
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_137
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_166

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036612	KH_dom_type_1_sf	SUPERFAMILY	159	247
IPR009210	ASCC1	PANTHER	64	495
IPR004087	KH_dom	SMART	157	225
IPR019510	AKAP7-like_phosphoesterase	Pfam	235	494
IPR004088	KH_dom_type_1	Pfam	162	221
IPR036612	KH_dom_type_1_sf	Gene3D	147	229
IPR009097	Cyclic_Pdiesterase	SUPERFAMILY	324	494

No CAZYmes available for this sequence

External Links

No external refs found!