Sobic.003G012000.1

Description : GTP binding;GTP binding

Gene families : OG_01_0008423 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008423_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G012000.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G012000.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_242
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_134

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR005225	Small_GTP-bd_dom	TIGRFAM	99	263
IPR005225	Small_GTP-bd_dom	TIGRFAM	303	473
IPR016484	GTPase_Der	Hamap	97	571
IPR027417	P-loop_NTPase	SUPERFAMILY	169	472
IPR016484	GTPase_Der	TIGRFAM	98	566
IPR027417	P-loop_NTPase	Gene3D	298	484
IPR027417	P-loop_NTPase	Gene3D	76	273
IPR032859	KH_dom-like	Pfam	489	568
IPR006073	GTP-bd	Pfam	100	220
IPR006073	GTP-bd	Pfam	304	427
IPR027417	P-loop_NTPase	SUPERFAMILY	98	161
IPR006073	GTP-bd	PRINTS	304	324
IPR006073	GTP-bd	PRINTS	353	368
IPR015946	KH_dom-like_a/b	Gene3D	485	569

No CAZYmes available for this sequence

External Links

No external refs found!