Sevir.1G277400.2

Description : isoprenoid F

Gene families : OG_01_0011272 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011272_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G277400.2
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G277400.2
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_206
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_66

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
MF	GO:0008685	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity	ISM	GOs from InterProScan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	ISM	GOs from InterProScan
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016849	phosphorus-oxygen lyase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003526	MECDP_synthase	PANTHER	33	269
IPR003526	MECDP_synthase	Hamap	113	268
IPR020555	MECDP_synthase_CS	ProSitePatterns	147	162
IPR003526	MECDP_synthase	Pfam	113	266
IPR003526	MECDP_synthase	CDD	114	266
IPR036571	MECDP_synthase_sf	SUPERFAMILY	112	268
IPR036571	MECDP_synthase_sf	Gene3D	110	269
IPR003526	MECDP_synthase	TIGRFAM	114	268

No CAZYmes available for this sequence

External Links

No external refs found!