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  5. Sobic.003G016900.4

Sobic.003G016900.4


Description : splicing factor, putative


Gene families : OG_01_0004616 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004616_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G016900.4
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G016900.4
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_101
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_97


Type GO Term Name Evidence Source
BP GO:0000245 spliceosomal complex assembly ISM GOs from InterProScan
MF GO:0003729 mRNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011989 ARM-like Gene3D 472 812
IPR011989 ARM-like Gene3D 1040 1256
IPR034085 TOG SMART 864 1099
IPR016024 ARM-type_fold SUPERFAMILY 482 1274
IPR021133 HEAT_type_2 ProSiteProfiles 668 706
IPR011989 ARM-like Gene3D 824 1037
IPR038737 SF3b_su1-like PANTHER 2 1287
IPR015016 SF3b_su1 Pfam 303 433

No CAZYmes available for this sequence

No external refs found!