Sobic.003G028300.1

Description : Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

Gene families : OG_01_0000050 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000050_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G028300.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G028300.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_104
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_186

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0003700	DNA-binding transcription factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0008289	lipid binding	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR044830	HD-Zip_III	PANTHER	2	844
IPR002913	START_lipid-bd_dom	SMART	163	373
IPR023393	START-like_dom_sf	Gene3D	199	380
IPR001356	Homeobox_dom	ProSiteProfiles	11	75
IPR002913	START_lipid-bd_dom	Pfam	164	371
IPR013978	MEKHLA	Pfam	700	843
IPR009057	Homeobox-like_sf	SUPERFAMILY	17	77
IPR002913	START_lipid-bd_dom	ProSiteProfiles	154	373
IPR001356	Homeobox_dom	SMART	13	79
IPR001356	Homeobox_dom	CDD	16	76
IPR001356	Homeobox_dom	Pfam	16	74

No CAZYmes available for this sequence

External Links

No external refs found!