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  5. Sobic.003G036800.1

Sobic.003G036800.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0007150 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007150_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G036800.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G036800.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_280
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_520


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt SMART 200 237
IPR001680 WD40_rpt SMART 121 160
IPR001680 WD40_rpt SMART 244 281
IPR001680 WD40_rpt SMART 372 409
IPR001680 WD40_rpt SMART 284 321
IPR001680 WD40_rpt Pfam 285 320
IPR001680 WD40_rpt Pfam 128 160
IPR001680 WD40_rpt Pfam 246 281
IPR020472 G-protein_beta_WD-40_rep PRINTS 308 322
IPR020472 G-protein_beta_WD-40_rep PRINTS 147 161
IPR020472 G-protein_beta_WD-40_rep PRINTS 268 282
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 123 415
IPR019775 WD40_repeat_CS ProSitePatterns 268 282
IPR001680 WD40_rpt ProSiteProfiles 251 290
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 107 185
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 186 422
IPR001680 WD40_rpt ProSiteProfiles 128 169

No CAZYmes available for this sequence

No external refs found!