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  5. Sevir.8G145900.1

Sevir.8G145900.1


Description : chitinase A


Gene families : OG_01_0002054 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002054_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.8G145900.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.8G145900.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_180
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_13


Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045321 Cts1-like CDD 37 302
IPR001223 Glyco_hydro18_cat ProSiteProfiles 37 304
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 34 303
IPR001223 Glyco_hydro18_cat Pfam 40 290
HMM Family HMM Length Query Length e-Value Query Start Query End
GH18 296 305 1.4e-11 56 256
No external refs found!