Sobic.003G058900.4

Description : TBP-associated factor 15B

Gene families : OG_01_0002995 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002995_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G058900.4
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G058900.4
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_72
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_177

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001876	Znf_RanBP2	ProSiteProfiles	100	131
IPR001876	Znf_RanBP2	ProSitePatterns	104	125
IPR000504	RRM_dom	Pfam	356	385
IPR036443	Znf_RanBP2_sf	SUPERFAMILY	93	131
IPR000504	RRM_dom	SMART	355	441
IPR001876	Znf_RanBP2	Pfam	100	130
IPR035979	RBD_domain_sf	SUPERFAMILY	352	477
IPR012677	Nucleotide-bd_a/b_plait_sf	Gene3D	334	489
IPR000504	RRM_dom	ProSiteProfiles	354	445
IPR001876	Znf_RanBP2	SMART	102	128

No CAZYmes available for this sequence

External Links

No external refs found!