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  5. Sobic.003G063400.2

Sobic.003G063400.2


Description : Nucleotide-diphospho-sugar transferases superfamily protein


Gene families : OG_01_0039801 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0039801_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G063400.2
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G063400.2
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_278
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_485


Type GO Term Name Evidence Source
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR029044 Nucleotide-diphossugar_trans SUPERFAMILY 2 209
IPR005027 Glyco_trans_43 PANTHER 1 282
IPR005027 Glyco_trans_43 Pfam 1 195
IPR029044 Nucleotide-diphossugar_trans Gene3D 1 223
HMM Family HMM Length Query Length e-Value Query Start Query End
GT43 212 285 2.7e-48 1 196
No external refs found!