1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.003G082600.1

Sobic.003G082600.1


Description : calmodulin like 23


Gene families : OG_01_0012578 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012578_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G082600.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G082600.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_167
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_66


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011992 EF-hand-dom_pair SUPERFAMILY 15 182
IPR002048 EF_hand_dom Pfam 121 182
IPR002048 EF_hand_dom Pfam 32 96
IPR002048 EF_hand_dom ProSiteProfiles 28 63
IPR002048 EF_hand_dom CDD 32 97
IPR002048 EF_hand_dom CDD 121 182
IPR002048 EF_hand_dom ProSiteProfiles 68 103
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 166 178
IPR002048 EF_hand_dom ProSiteProfiles 153 188
IPR002048 EF_hand_dom ProSiteProfiles 117 152
IPR002048 EF_hand_dom SMART 32 60
IPR002048 EF_hand_dom SMART 157 185
IPR002048 EF_hand_dom SMART 121 149
IPR002048 EF_hand_dom SMART 72 100
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 81 93
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 41 53
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 130 142

No CAZYmes available for this sequence

No external refs found!