Description : respiratory burst oxidase homologue D
Gene families : OG_01_0012904 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012904_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.8G151700.1 | |
Neighborhood | Setaria viridis coexpression network - Anderson et al (2021): Sevir.8G151700.1 | |
Cluster | Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_58 | |
Cluster | Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_13 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004601 | peroxidase activity | ISM | GOs from InterProScan |
MF | GO:0005509 | calcium ion binding | ISM | GOs from InterProScan |
CC | GO:0016020 | membrane | ISM | GOs from InterProScan |
MF | GO:0016491 | oxidoreductase activity | ISM | GOs from InterProScan |
MF | GO:0050664 | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | ISM | GOs from InterProScan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Source | Start | Stop |
---|---|---|---|---|
IPR002048 | EF_hand_dom | CDD | 258 | 320 |
IPR002048 | EF_hand_dom | ProSiteProfiles | 254 | 289 |
IPR013112 | FAD-bd_8 | Pfam | 620 | 738 |
IPR013623 | NADPH_Ox | Pfam | 161 | 256 |
IPR017927 | FAD-bd_FR_type | ProSiteProfiles | 615 | 741 |
IPR039261 | FNR_nucleotide-bd | Gene3D | 736 | 931 |
IPR011992 | EF-hand-dom_pair | SUPERFAMILY | 187 | 331 |
IPR002048 | EF_hand_dom | CDD | 222 | 283 |
IPR013130 | Fe3_Rdtase_TM_dom | Pfam | 419 | 576 |
IPR013121 | Fe_red_NAD-bd_6 | Pfam | 745 | 913 |
IPR000778 | Cyt_b245_heavy_chain | PRINTS | 558 | 578 |
IPR000778 | Cyt_b245_heavy_chain | PRINTS | 465 | 483 |
IPR000778 | Cyt_b245_heavy_chain | PRINTS | 727 | 740 |
IPR000778 | Cyt_b245_heavy_chain | PRINTS | 750 | 767 |
IPR017938 | Riboflavin_synthase-like_b-brl | SUPERFAMILY | 618 | 737 |
IPR018247 | EF_Hand_1_Ca_BS | ProSitePatterns | 267 | 279 |
IPR039261 | FNR_nucleotide-bd | SUPERFAMILY | 742 | 931 |
No CAZYmes available for this sequence
No external refs found! |