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  5. Sobic.003G110800.2

Sobic.003G110800.2


Description : Major facilitator superfamily protein


Gene families : OG_01_0007363 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007363_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G110800.2
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G110800.2 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_150


Type GO Term Name Evidence Source
BP GO:0008643 carbohydrate transport ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
MF GO:0022857 transmembrane transporter activity ISM GOs from InterProScan
MF GO:0051119 sugar transmembrane transporter activity ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR005829 Sugar_transporter_CS ProSitePatterns 330 347
IPR005828 MFS_sugar_transport-like Pfam 43 474
IPR003663 Sugar/inositol_transpt PRINTS 401 413
IPR003663 Sugar/inositol_transpt PRINTS 49 59
IPR003663 Sugar/inositol_transpt PRINTS 132 151
IPR003663 Sugar/inositol_transpt PRINTS 288 298
IPR003663 Sugar/inositol_transpt PRINTS 378 399
IPR036259 MFS_trans_sf Gene3D 30 479
IPR044775 MFS_ERD6/Tret1-like CDD 48 471
IPR003663 Sugar/inositol_transpt TIGRFAM 41 472
IPR020846 MFS_dom ProSiteProfiles 41 465
IPR036259 MFS_trans_sf SUPERFAMILY 43 473
IPR005829 Sugar_transporter_CS ProSitePatterns 95 111

No CAZYmes available for this sequence

No external refs found!