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  5. Sobic.003G117700.1

Sobic.003G117700.1


Description : Zinc finger C-x8-C-x5-C-x3-H type family protein


Gene families : OG_01_0008757 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008757_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G117700.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G117700.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_148
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_188


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000571 Znf_CCCH ProSiteProfiles 41 69
IPR036855 Znf_CCCH_sf SUPERFAMILY 45 69
IPR000571 Znf_CCCH Pfam 91 116
IPR000571 Znf_CCCH Pfam 136 160
IPR000571 Znf_CCCH Pfam 335 360
IPR000571 Znf_CCCH Pfam 43 68
IPR000571 Znf_CCCH Pfam 289 314
IPR036855 Znf_CCCH_sf SUPERFAMILY 291 314
IPR000571 Znf_CCCH ProSiteProfiles 287 315
IPR036855 Znf_CCCH_sf SUPERFAMILY 92 117
IPR000571 Znf_CCCH ProSiteProfiles 89 117
IPR000571 Znf_CCCH ProSiteProfiles 133 161
IPR000571 Znf_CCCH ProSiteProfiles 333 361
IPR000571 Znf_CCCH SMART 133 160
IPR000571 Znf_CCCH SMART 89 116
IPR000571 Znf_CCCH SMART 333 360
IPR000571 Znf_CCCH SMART 287 314
IPR000571 Znf_CCCH SMART 41 68
IPR036855 Znf_CCCH_sf SUPERFAMILY 335 361
IPR036855 Znf_CCCH_sf SUPERFAMILY 135 160

No CAZYmes available for this sequence

No external refs found!