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  5. Sobic.003G117800.1

Sobic.003G117800.1


Description : Zinc finger C-x8-C-x5-C-x3-H type family protein


Gene families : OG_01_0006777 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006777_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G117800.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G117800.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_231
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_154


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000571 Znf_CCCH ProSiteProfiles 80 108
IPR000571 Znf_CCCH ProSiteProfiles 125 153
IPR036855 Znf_CCCH_sf SUPERFAMILY 281 305
IPR036855 Znf_CCCH_sf SUPERFAMILY 35 59
IPR000571 Znf_CCCH ProSiteProfiles 277 305
IPR036855 Znf_CCCH_sf SUPERFAMILY 324 352
IPR000571 Znf_CCCH ProSiteProfiles 31 59
IPR000571 Znf_CCCH Pfam 127 152
IPR000571 Znf_CCCH Pfam 279 304
IPR000571 Znf_CCCH Pfam 33 58
IPR000571 Znf_CCCH Pfam 82 107
IPR000571 Znf_CCCH Pfam 327 350
IPR000571 Znf_CCCH ProSiteProfiles 323 351
IPR036855 Znf_CCCH_sf SUPERFAMILY 83 109
IPR036855 Znf_CCCH_sf SUPERFAMILY 128 152
IPR000571 Znf_CCCH SMART 80 107
IPR000571 Znf_CCCH SMART 125 152
IPR000571 Znf_CCCH SMART 323 350
IPR000571 Znf_CCCH SMART 31 58
IPR000571 Znf_CCCH SMART 277 304

No CAZYmes available for this sequence

No external refs found!