Sobic.003G128800.1

Description : expansin A14

Gene families : OG_01_0000144 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000144_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G128800.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G128800.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_266
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_239

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009664	plant-type cell wall organization	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036749	Expansin_CBD_sf	SUPERFAMILY	149	241
IPR002963	Expansin	PRINTS	198	219
IPR002963	Expansin	PRINTS	53	67
IPR002963	Expansin	PRINTS	91	101
IPR002963	Expansin	PRINTS	127	140
IPR002963	Expansin	PRINTS	227	243
IPR002963	Expansin	PRINTS	163	184
IPR002963	Expansin	PRINTS	151	163
IPR002963	Expansin	PRINTS	110	127
IPR002963	Expansin	PANTHER	7	244
IPR036908	RlpA-like_sf	SUPERFAMILY	22	170
IPR007112	Expansin/allergen_DPBB_dom	SMART	58	142
IPR007117	Expansin_CBD	Pfam	153	230
IPR036749	Expansin_CBD_sf	Gene3D	152	244
IPR009009	RlpA-like_DPBB	Pfam	58	142
IPR036908	RlpA-like_sf	Gene3D	11	147
IPR007117	Expansin_CBD	ProSiteProfiles	162	241
IPR007112	Expansin/allergen_DPBB_dom	ProSiteProfiles	41	152
IPR007118	Expan_Lol_pI	PRINTS	62	80
IPR007118	Expan_Lol_pI	PRINTS	22	37
IPR007118	Expan_Lol_pI	PRINTS	189	203
IPR007118	Expan_Lol_pI	PRINTS	227	241
IPR007118	Expan_Lol_pI	PRINTS	40	58
IPR007118	Expan_Lol_pI	PRINTS	135	151

No CAZYmes available for this sequence

External Links

No external refs found!