1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.003G138550.1

Sobic.003G138550.1


Description : pentatricopeptide (PPR) repeat-containing protein


Gene families : OG_01_0000170 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000170_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G138550.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G138550.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_93


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt TIGRFAM 60 93
IPR002885 Pentatricopeptide_rpt TIGRFAM 116 149
IPR011990 TPR-like_helical_dom_sf Gene3D 110 247
IPR002885 Pentatricopeptide_rpt Pfam 57 104
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 58 92
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 114 148
IPR002885 Pentatricopeptide_rpt Pfam 116 141
IPR011990 TPR-like_helical_dom_sf Gene3D 5 109

No CAZYmes available for this sequence

No external refs found!