Sobic.003G148900.2

Description : pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein

Gene families : OG_01_0014084 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014084_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G148900.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G148900.2
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_182
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_228

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002478	PUA	Pfam	93	170
IPR016437	MCT-1/Tma20	PIRSF	1	181
IPR041366	Pre-PUA	Pfam	7	88
IPR016437	MCT-1/Tma20	PANTHER	1	178
IPR015947	PUA-like_sf	SUPERFAMILY	91	177
IPR002478	PUA	SMART	92	171
IPR004521	Uncharacterised_CHP00451	TIGRFAM	62	172

No CAZYmes available for this sequence

External Links

No external refs found!