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  5. Sobic.003G152400.1

Sobic.003G152400.1


Description : protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases


Gene families : OG_01_0002792 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002792_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G152400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G152400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_105
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_69


Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006468 protein phosphorylation ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 1295 1461
IPR001680 WD40_rpt SMART 1615 1650
IPR001680 WD40_rpt SMART 1344 1381
IPR001680 WD40_rpt SMART 1513 1551
IPR001680 WD40_rpt SMART 1298 1341
IPR016024 ARM-type_fold SUPERFAMILY 832 1119
IPR000719 Prot_kinase_dom SMART 145 799
IPR000409 BEACH_dom ProSiteProfiles 337 604
IPR000409 BEACH_dom Pfam 350 562
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 1302 1647
IPR011989 ARM-like Gene3D 814 1122
IPR000409 BEACH_dom CDD 350 581
IPR019775 WD40_repeat_CS ProSitePatterns 1538 1552
IPR001680 WD40_rpt ProSiteProfiles 1520 1560
IPR011009 Kinase-like_dom_sf SUPERFAMILY 724 816
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 1462 1650
IPR036372 BEACH_dom_sf Gene3D 340 581
IPR000409 BEACH_dom SMART 349 581
IPR011009 Kinase-like_dom_sf SUPERFAMILY 213 298
IPR000719 Prot_kinase_dom Pfam 211 293
IPR000719 Prot_kinase_dom ProSiteProfiles 145 478
IPR036372 BEACH_dom_sf SUPERFAMILY 332 581

No CAZYmes available for this sequence

No external refs found!