Sobic.003G158000.1

Description : dual specificity protein phosphatase family protein

Gene families : OG_01_0001351 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001351_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G158000.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G158000.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_329
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_206

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004721	phosphoprotein phosphatase activity	ISM	GOs from InterProScan
BP	GO:0006470	protein dephosphorylation	ISM	GOs from InterProScan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016301	kinase activity	ISM	GOs from InterProScan
BP	GO:0016311	dephosphorylation	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016791	phosphatase activity	ISM	GOs from InterProScan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0030865	cortical cytoskeleton organization	None	Extended
BP	GO:0031122	cytoplasmic microtubule organization	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043622	cortical microtubule organization	ISM	GOs from InterProScan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR015275	Actin-fragmin_kin_cat_dom	Pfam	74	329
IPR016130	Tyr_Pase_AS	ProSitePatterns	727	737
IPR029021	Prot-tyrosine_phosphatase-like	Gene3D	623	795
IPR000340	Dual-sp_phosphatase_cat-dom	Pfam	648	780
IPR029021	Prot-tyrosine_phosphatase-like	SUPERFAMILY	640	785
IPR011009	Kinase-like_dom_sf	SUPERFAMILY	21	385
IPR036940	PI3/4_kinase_cat_sf	Gene3D	242	460
IPR000387	Tyr_Pase_dom	ProSiteProfiles	712	761
IPR035010	PHS1	PANTHER	1	849
IPR020422	TYR_PHOSPHATASE_DUAL_dom	ProSiteProfiles	640	785
IPR020422	TYR_PHOSPHATASE_DUAL_dom	SMART	640	782

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.003G158000.1

Expression Profile

Co-expression Networks

Functional Annotation