Sobic.003G179700.1

Description : beta-galactosidase 7

Gene families : OG_01_0044407 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0044407_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G179700.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G179700.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_84
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_132

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0030246	carbohydrate binding	ISM	GOs from InterProScan
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR041392	GHD	Pfam	350	419
IPR043159	Lectin_gal-bd_sf	Gene3D	735	830
IPR001944	Glycoside_Hdrlase_35	PANTHER	6	817
IPR019801	Glyco_hydro_35_CS	ProSitePatterns	173	185
IPR001944	Glycoside_Hdrlase_35	PRINTS	171	186
IPR001944	Glycoside_Hdrlase_35	PRINTS	620	634
IPR001944	Glycoside_Hdrlase_35	PRINTS	290	305
IPR001944	Glycoside_Hdrlase_35	PRINTS	310	326
IPR001944	Glycoside_Hdrlase_35	PRINTS	38	55
IPR001944	Glycoside_Hdrlase_35	PRINTS	114	133
IPR001944	Glycoside_Hdrlase_35	PRINTS	59	77
IPR001944	Glycoside_Hdrlase_35	PRINTS	647	663
IPR001944	Glycoside_Hdrlase_35	PRINTS	253	268
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	27	346
IPR031330	Gly_Hdrlase_35_cat	Pfam	35	341
IPR000922	Lectin_gal-bd_dom	ProSiteProfiles	746	830
IPR008979	Galactose-bd-like_sf	SUPERFAMILY	403	571
IPR008979	Galactose-bd-like_sf	SUPERFAMILY	584	746

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH35	307	831	6.9e-116	36	341

External Links

No external refs found!