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  5. Sobic.003G187800.1

Sobic.003G187800.1


Description : Fatty acid/sphingolipid desaturase


Gene families : OG_01_0010935 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010935_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G187800.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G187800.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_154


Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012171 Fatty_acid_desaturase PIRSF 10 459
IPR001199 Cyt_B5-like_heme/steroid-bd PRINTS 54 64
IPR001199 Cyt_B5-like_heme/steroid-bd PRINTS 91 103
IPR001199 Cyt_B5-like_heme/steroid-bd PRINTS 64 78
IPR001199 Cyt_B5-like_heme/steroid-bd Pfam 33 103
IPR005804 FA_desaturase_dom Pfam 162 433
IPR001199 Cyt_B5-like_heme/steroid-bd ProSiteProfiles 29 104
IPR036400 Cyt_B5-like_heme/steroid_sf Gene3D 25 106
IPR012171 Fatty_acid_desaturase PANTHER 20 479
IPR036400 Cyt_B5-like_heme/steroid_sf SUPERFAMILY 25 108
IPR001199 Cyt_B5-like_heme/steroid-bd SMART 32 104

No CAZYmes available for this sequence

No external refs found!