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Description : stomatal cytokinesis defective / SCD1 protein (SCD1)
Gene families : OG_01_0005976 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005976_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G195900.1 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G195900.1 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_148 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_201 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR043153 | DENN_C | Gene3D | 205 | 390 |
| IPR001194 | cDENN_dom | SMART | 125 | 309 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 992 | 1029 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 882 | 896 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 965 | 979 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 1047 | 1061 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 965 | 979 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 800 | 1028 |
| IPR001680 | WD40_rpt | SMART | 900 | 937 |
| IPR001680 | WD40_rpt | SMART | 981 | 1020 |
| IPR001680 | WD40_rpt | SMART | 844 | 895 |
| IPR001680 | WD40_rpt | SMART | 1063 | 1102 |
| IPR001680 | WD40_rpt | SMART | 940 | 978 |
| IPR001680 | WD40_rpt | SMART | 1161 | 1200 |
| IPR001680 | WD40_rpt | SMART | 1106 | 1143 |
| IPR001680 | WD40_rpt | SMART | 1023 | 1060 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 1007 | 1021 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 1187 | 1201 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 1030 | 1069 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 1070 | 1102 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 947 | 987 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 846 | 1203 |
| IPR005112 | dDENN_dom | SMART | 369 | 439 |
| IPR001194 | cDENN_dom | Pfam | 127 | 307 |
| IPR037516 | Tripartite_DENN | ProSiteProfiles | 22 | 447 |
| IPR005113 | uDENN_dom | Pfam | 40 | 106 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 877 | 895 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 1029 | 1204 |
| IPR005113 | uDENN_dom | SMART | 4 | 107 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 907 | 946 |
| IPR005112 | dDENN_dom | Pfam | 400 | 452 |
| IPR001680 | WD40_rpt | Pfam | 1026 | 1060 |
| IPR001680 | WD40_rpt | Pfam | 905 | 937 |
| IPR001680 | WD40_rpt | Pfam | 846 | 895 |
| IPR001680 | WD40_rpt | Pfam | 942 | 978 |
| IPR001680 | WD40_rpt | Pfam | 1065 | 1101 |
No CAZYmes available for this sequence
| No external refs found! |