Sobic.003G197100.2

Description : beta galactosidase 1

Gene families : OG_01_0000304 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000304_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G197100.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G197100.2
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_66
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_166

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0030246	carbohydrate binding	ISM	GOs from InterProScan
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR031330	Gly_Hdrlase_35_cat	Pfam	33	337
IPR019801	Glyco_hydro_35_CS	ProSitePatterns	171	183
IPR001944	Glycoside_Hdrlase_35	PANTHER	9	821
IPR008979	Galactose-bd-like_sf	SUPERFAMILY	400	568
IPR000922	Lectin_gal-bd_dom	ProSiteProfiles	741	827
IPR041392	GHD	Pfam	345	416
IPR000922	Lectin_gal-bd_dom	Pfam	749	826
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	25	342
IPR001944	Glycoside_Hdrlase_35	PRINTS	637	653
IPR001944	Glycoside_Hdrlase_35	PRINTS	57	75
IPR001944	Glycoside_Hdrlase_35	PRINTS	112	131
IPR001944	Glycoside_Hdrlase_35	PRINTS	305	321
IPR001944	Glycoside_Hdrlase_35	PRINTS	610	624
IPR001944	Glycoside_Hdrlase_35	PRINTS	36	53
IPR001944	Glycoside_Hdrlase_35	PRINTS	285	300
IPR001944	Glycoside_Hdrlase_35	PRINTS	169	184
IPR001944	Glycoside_Hdrlase_35	PRINTS	248	263
IPR043159	Lectin_gal-bd_sf	Gene3D	733	827
IPR008979	Galactose-bd-like_sf	SUPERFAMILY	577	739

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH35	307	828	5.1e-117	34	336

External Links

No external refs found!