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  5. Sobic.003G198300.1

Sobic.003G198300.1


Description : zinc ion binding


Gene families : OG_01_0012625 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012625_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G198300.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G198300.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_323
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_214


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003677 DNA binding ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR039999 LYAR PANTHER 1 292
IPR036236 Znf_C2H2_sf SUPERFAMILY 30 58
IPR036236 Znf_C2H2_sf SUPERFAMILY 1 26
IPR003604 Matrin/U1-like-C_Znf_C2H2 SMART 91 125
IPR036236 Znf_C2H2_sf SUPERFAMILY 78 126
IPR014898 Znf_C2H2_LYAR Pfam 30 57

No CAZYmes available for this sequence

No external refs found!