Sobic.003G216500.1

Description : ATPase, F0/V0 complex, subunit C protein

Gene families : OG_01_0011149 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011149_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G216500.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G216500.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_244
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_153

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	ISM	GOs from InterProScan
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	ISM	GOs from InterProScan
CC	GO:0033179	proton-transporting V-type ATPase, V0 domain	ISM	GOs from InterProScan
BP	GO:0034220	monoatomic ion transmembrane transport	None	Extended
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	None	Extended
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	ISM	GOs from InterProScan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0098655	monoatomic cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
BP	GO:1902600	proton transmembrane transport	ISM	GOs from InterProScan

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002379	ATPase_proteolipid_c-like_dom	Pfam	107	166
IPR002379	ATPase_proteolipid_c-like_dom	Pfam	23	82
IPR035921	F/V-ATP_Csub_sf	Gene3D	18	173
IPR000245	ATPase_proteolipid_csu	PRINTS	62	86
IPR000245	ATPase_proteolipid_csu	PRINTS	118	144
IPR000245	ATPase_proteolipid_csu	PRINTS	36	60
IPR000245	ATPase_proteolipid_csu	PRINTS	145	168
IPR035921	F/V-ATP_Csub_sf	SUPERFAMILY	99	167
IPR035921	F/V-ATP_Csub_sf	SUPERFAMILY	16	85

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.003G216500.1

Expression Profile

Co-expression Networks

Functional Annotation