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  5. Sobic.003G221900.1

Sobic.003G221900.1


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_01_0006455 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006455_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G221900.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G221900.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_18


Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISM GOs from InterProScan
MF GO:0046983 protein dimerization activity ISM GOs from InterProScan
BP GO:0055072 obsolete iron ion homeostasis ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011598 bHLH_dom SMART 35 85
IPR011598 bHLH_dom ProSiteProfiles 29 79
IPR036638 HLH_DNA-bd_sf SUPERFAMILY 27 99
IPR036638 HLH_DNA-bd_sf Gene3D 28 112
IPR044579 bHLH11/121 PANTHER 12 312
IPR011598 bHLH_dom Pfam 30 79

No CAZYmes available for this sequence

No external refs found!