Sobic.003G223500.1

Description : Transducin/WD40 repeat-like superfamily protein

Gene families : OG_01_0009557 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009557_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G223500.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G223500.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_149
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_51

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009967	positive regulation of signal transduction	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010647	positive regulation of cell communication	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023056	positive regulation of signaling	None	Extended
BP	GO:0032006	regulation of TOR signaling	None	Extended
BP	GO:0032008	positive regulation of TOR signaling	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:1902531	regulation of intracellular signal transduction	None	Extended
BP	GO:1902533	positive regulation of intracellular signal transduction	None	Extended
BP	GO:1903432	regulation of TORC1 signaling	None	Extended
BP	GO:1904263	positive regulation of TORC1 signaling	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR037363	Sec13/Seh1_fam	PANTHER	10	320
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	11	319
IPR001680	WD40_rpt	ProSiteProfiles	272	304
IPR001680	WD40_rpt	SMART	41	82
IPR001680	WD40_rpt	SMART	211	253
IPR001680	WD40_rpt	SMART	92	133
IPR001680	WD40_rpt	SMART	265	304
IPR001680	WD40_rpt	SMART	3	39
IPR036322	WD40_repeat_dom_sf	SUPERFAMILY	16	307
IPR001680	WD40_rpt	Pfam	269	303

No CAZYmes available for this sequence

External Links

No external refs found!