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  5. Sobic.003G226500.1

Sobic.003G226500.1


Description : phosphatase-related


Gene families : OG_01_0015215 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015215_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G226500.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G226500.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_131
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_147


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0051087 protein-folding chaperone binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR044563 Sgt1-like PANTHER 3 364
IPR019734 TPR_repeat ProSiteProfiles 37 70
IPR008978 HSP20-like_chaperone Gene3D 163 253
IPR011990 TPR-like_helical_dom_sf Gene3D 1 144
IPR008978 HSP20-like_chaperone SUPERFAMILY 160 257
IPR007699 SGS_dom ProSiteProfiles 274 364
IPR007052 CS_dom ProSiteProfiles 162 251
IPR019734 TPR_repeat SMART 71 104
IPR019734 TPR_repeat SMART 37 70
IPR019734 TPR_repeat SMART 3 36
IPR007052 CS_dom Pfam 166 241
IPR019734 TPR_repeat Pfam 72 99
IPR007699 SGS_dom Pfam 282 362
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 6 115

No CAZYmes available for this sequence

No external refs found!