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  5. Sobic.003G231900.1

Sobic.003G231900.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0001823 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001823_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G231900.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G231900.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_300
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_134


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 23 56
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 5 342
IPR001680 WD40_rpt ProSiteProfiles 109 150
IPR001680 WD40_rpt ProSiteProfiles 248 282
IPR001680 WD40_rpt SMART 16 55
IPR001680 WD40_rpt SMART 61 99
IPR001680 WD40_rpt SMART 102 141
IPR001680 WD40_rpt SMART 144 180
IPR001680 WD40_rpt SMART 229 273
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 20 307
IPR020472 G-protein_beta_WD-40_rep PRINTS 86 100
IPR020472 G-protein_beta_WD-40_rep PRINTS 42 56
IPR020472 G-protein_beta_WD-40_rep PRINTS 128 142
IPR001680 WD40_rpt Pfam 28 54
IPR001680 WD40_rpt Pfam 234 273
IPR001680 WD40_rpt Pfam 107 141
IPR001680 WD40_rpt Pfam 69 98
IPR001680 WD40_rpt ProSiteProfiles 67 108

No CAZYmes available for this sequence

No external refs found!