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  5. Sobic.003G234600.1

Sobic.003G234600.1


Description : beta carbonic anhydrase 4


Gene families : OG_01_0028392 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0028392_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G234600.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G234600.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_32
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_94


Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
BP GO:0015976 carbon utilization ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015892 Carbonic_anhydrase_CS ProSitePatterns 141 161
IPR015892 Carbonic_anhydrase_CS ProSitePatterns 97 104
IPR036874 Carbonic_anhydrase_sf Gene3D 54 256
IPR001765 Carbonic_anhydrase SMART 85 255
IPR045066 Beta_CA_cladeB CDD 65 254
IPR001765 Carbonic_anhydrase Pfam 92 249
IPR001765 Carbonic_anhydrase PANTHER 1 256
IPR036874 Carbonic_anhydrase_sf SUPERFAMILY 48 255

No CAZYmes available for this sequence

No external refs found!