Sobic.003G243700.1

Description : E2F/DP family winged-helix DNA-binding domain

Gene families : OG_01_0003648 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003648_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G243700.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G243700.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_72
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_153

Type	GO Term	Name	Evidence	Source
CC	GO:0000814	ESCRT II complex	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0036452	ESCRT complex	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071985	multivesicular body sorting pathway	ISM	GOs from InterProScan
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR014041	ESCRT-II_cplx_Vps25-sub_N	Gene3D	5	101
IPR036388	WH-like_DNA-bd_sf	Gene3D	103	176
IPR008570	ESCRT-II_cplx_Vps25-sub	PANTHER	1	177
IPR008570	ESCRT-II_cplx_Vps25-sub	Pfam	13	143
IPR036390	WH_DNA-bd_sf	SUPERFAMILY	7	107
IPR036390	WH_DNA-bd_sf	SUPERFAMILY	103	175

No CAZYmes available for this sequence

External Links

No external refs found!