Sobic.003G249600.1

Description : vacuoleless1 (VCL1)

Gene families : OG_01_0004421 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004421_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G249600.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G249600.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_291
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_51

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	GOs from InterProScan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	ISM	GOs from InterProScan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007033	vacuole organization	ISM	GOs from InterProScan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006925	Vps16_C	Pfam	536	852
IPR006926	Vps16_N	Pfam	55	440
IPR016534	VPS16	PANTHER	1	870
IPR038132	Vps16_C_sf	Gene3D	678	771
IPR016534	VPS16	PIRSF	2	875

No CAZYmes available for this sequence

External Links

No external refs found!